Pipeline Output

There are two ways to access all of the pipeline output:

Use Globus (it is free). The shared link is here. You can learn how to set up a personal Globus account here.
Use the pass-through website. http://berglandlab.uvadcos.io/

The following table contains hyperlinks to the original index folders with the pipeline output data for each sample. Scroll to see all samples. This table is outdated and an update will be comign soon.

Sample Name	Link to Index Folder
AT_Nie_Mau_1_2014-07-20	Link
AT_Nie_Mau_1_2014-10-19	Link
AT_Nie_Mau_1_2015-07-20	Link
AT_Nie_Mau_1_2015-10-19	Link
AT_Kar_See_1_2014-08-17	Link
AT_Kar_See_1_2016-08-01	Link
AT_Wie_Gro_1_2012-10-20	Link
AT_Wie_Gro_1_2012-08-03	Link
BY_Bre_Bre_1_2015-09-11	Link
US_Cal_Esp_1_2012-08-22	Link
US_Cal_Esp_1_2012-11-20	Link
US_Cal_Esp_1_2012-06-13	Link
US_Cal_Esp_1_2013-09-01	Link
US_Cal_Esp_1_2013-05-07	Link
US_Cal_Pla_1_2012-08-25	Link
US_Cal_Pla_1_2012-11-18	Link
US_Cal_Pla_1_2013-08-30	Link
US_Cal_Pla_1_2013-12-16	Link
US_Cal_Sto_1_2012-10-01	Link
US_Cal_Sto_1_2012-11-15	Link
US_Cal_Sto_1_2013-09-03	Link
US_Cal_Tuo_1_2012-10-10	Link
US_Cal_Tuo_1_2012-11-17	Link
US_Cal_Tuo_1_2013-08-31	Link
US_Cal_Tuo_1_2013-12-08	Link
US_Cal_Tuo_1_2013-05-14	Link
CH_Vau_Cha_1_2014-07-24	Link
CH_Vau_Cha_1_2014-10-05	Link
CH_Vau_Cha_1_2015-08-01	Link
CH_Vau_Cha_1_2016-08-15	Link
CY_Nic_Nic_1_2014-08-10	Link
DE_Bad_Bro_1_2014-06-26	Link
DE_Bad_Bro_1_2014-10-15	Link
DE_Bad_Bro_1_2015-06-30	Link
DE_Bad_Bro_1_2015-10-25	Link
DE_Bad_Bro_1_2016-07-24	Link
DE_Bad_Bro_1_2016-10-23	Link
DE_Bay_Mun_1_2014-06-19	Link
DE_Bay_Mun_1_2014-09-03	Link
DE_Bay_Mun_1_2015-06-01	Link
DE_Bay_Mun_1_2015-09-01	Link
DE_Bay_Mun_1_2016-06-25	Link
DE_Bay_Mun_1_2016-09-01	Link
DK_Mid_Kar_1_2014-09-01	Link
DK_Mid_Kar_1_2014-11-25	Link
DK_Mid_Kar_1_2016-06-08	Link
DK_Mid_Kar_1_2016-09-15	Link
DK_Mid_Kar_1_2016-11-22	Link
ES_Gra_Ben_1_2016-10-08	Link
ES_Gra_Cor_1_2015-08-08	Link
ES_Ler_Gim_1_2014-10-20	Link
ES_Ler_Gim_1_2014-08-13	Link
ES_Ler_Gim_1_2015-06-28	Link
ES_Ler_Gim_1_2015-10-22	Link
ES_Ler_Gim_1_2016-08-25	Link
ES_Ler_Gim_1_2016-10-21	Link
ES_Gra_Gua_1_2015-09-12	Link
ES_Gra_Pur_1_2016-08-30	Link
ES_Ciu_Tom_1_2015-10-08	Link
ES_Ciu_Tom_1_2015-09-17	Link
ES_Ciu_Tom_1_2016-09-02	Link
ES_Ciu_Tom_1_2016-10-11	Link
ES_Bar_Bar_1_2012-10-16	Link
ES_Bar_Bar_1_2012-07-13	Link
FI_Pir_Aka_1_2014-07-25	Link
FI_Pir_Aka_1_2014-08-27	Link
FI_Pir_Aka_1_2015-10-01	Link
FI_Pir_Aka_1_2015-07-21	Link
FI_Pir_Aka_1_2016-07-24	Link
FI_Pir_Aka_1_2016-09-17	Link
FI_Cen_Ves_1_2014-07-26	Link
FI_Cen_Ves_1_2016-07-29	Link
US_Flo_Hom_1_2010-12-16	Link
US_Flo_Hom_1_2010-07-15	Link
FR_Dro_Got_1_2014-07-08	Link
FR_Dro_Got_1_2015-05-21	Link
FR_Dro_Got_1_2015-09-09	Link
FR_Dro_Got_1_2015-10-13	Link
FR_Dro_Got_1_2016-06-13	Link
FR_Ess_Vil_1_2014-08-18	Link
FR_Ess_Vil_1_2014-10-27	Link
FR_Ess_Vil_1_2015-08-10	Link
FR_Ess_Vil_1_2015-10-14	Link
FR_Ess_Vil_1_2016-08-12	Link
US_Geo_Ath_1_2014-10-15	Link
US_Geo_Ath_1_2014-06-17	Link
US_Geo_Hah_1_2008-07-16	Link
FR_Gua_Des_1_2015-12-16	Link
FR_Gua_Sai_1_2015-12-23	Link
HU_Sze_Sze_1_2016-08-28	Link
US_Ill_Urb_1_2015-07-11	Link
IT_Tre_San_1_2015-09-29	Link
IT_Tre_San_1_2015-10-10	Link
IT_Tre_Tre_1_2016-08-24	Link
US_Kan_Top_1_2014-10-22	Link
US_Kan_Top_1_2014-06-22	Link
US_Mas_Lan_1_2012-10-02	Link
US_Mas_Lan_1_2012-07-28	Link
US_Mas_Lan_1_2014-10-20	Link
US_Mas_Lan_1_2014-07-20	Link
US_Mai_Bow_1_2009-10-15	Link
US_Mai_Bow_2_2009-10-15	Link
US_Mic_Ben_1_2014-11-05	Link
US_Mic_Ben_1_2014-07-26	Link
US_Nor_Ral_2_2003-07-01	Link
US_New_Ith_1_2012-09-23	Link
US_New_Ith_1_2012-07-25	Link
CA_Ont_Sud_1_2015-09-30	Link
CA_Ont_Sud_1_2015-08-03	Link
US_Pen_Lin_1_2009-11-16	Link
US_Pen_Lin_1_2009-07-15	Link
US_Pen_Lin_1_2010-11-16	Link
US_Pen_Lin_1_2010-07-15	Link
US_Pen_Lin_1_2011-10-15	Link
US_Pen_Lin_1_2011-11-16	Link
US_Pen_Lin_1_2011-07-15	Link
US_Pen_Lin_1_2012-10-10	Link
US_Pen_Lin_1_2012-07-16	Link
US_Pen_Lin_1_2012-09-13	Link
US_Pen_Lin_1_2013-06-15	Link
US_Pen_Lin_1_2014-10-17	Link
US_Pen_Lin_1_2014-06-27	Link
US_Pen_Lin_1_2015-10-15	Link
US_Pen_Lin_1_2015-07-15	Link
US_Pen_Sta_1_2014-10-16	Link
US_Pen_Sta_1_2014-06-18	Link
US_Pen_Sta_1_2015-07-18	Link
PL_War_Brz_1_2015-09-28	Link
PL_War_Brz_1_2016-08-08	Link
PL_Pom_Gda_1_2016-08-01	Link
PT_Por_Rec_1_2014-09-26	Link
PT_Por_Rec_1_2015-09-01	Link
PT_Por_Rec_1_2016-10-01	Link
RS_Zaj_Kal_1_2016-06-30	Link
RS_Zaj_Kal_1_2016-09-13	Link
RS_Sre_Sla_1_2016-06-18	Link
RS_Sre_Sla_1_2016-09-09	Link
RU_Vla_Ale_1_2015-09-15	Link
RU_Vla_Ale_1_2016-10-15	Link
RU_Nov_Val_1_2014-08-17	Link
RU_Nov_Val_1_2016-08-23	Link
RU_Nov_Val_1_2016-09-29	Link
RU_Nov_Val_1_2016-10-24	Link
RU_Tul_Tul_1_2015-09-20	Link
RU_Nov_Val_1_2015-08-23	Link
RU_Nov_Val_1_2015-10-05	Link
US_Sou_Eut_1_2010-07-15	Link
SE_Ska_Lun_1_2014-07-31	Link
SE_Ska_Lun_1_2015-08-24	Link
SE_Ska_Lun_1_2015-08-08	Link
TR_Ank_Yes_1_2014-08-31	Link
TR_Ank_Yes_1_2014-10-23	Link
TR_Ank_Yes_1_2015-05-01	Link
TR_Ank_Yes_1_2015-06-01	Link
TR_Ank_Yes_1_2015-07-28	Link
TR_Ank_Yes_1_2015-08-27	Link
TR_Ank_Yes_1_2015-09-17	Link
TR_Ank_Yes_1_2015-10-15	Link
TR_Ank_Yes_1_2016-05-26	Link
TR_Ank_Yes_1_2016-06-25	Link
TR_Ank_Yes_1_2016-07-27	Link
TR_Ank_Yes_1_2016-08-24	Link
TR_Ank_Yes_1_2016-09-27	Link
TR_Ank_Yes_1_2016-10-13	Link
UA_Kie_Cho_2_2014-09-13	Link
UA_Kie_Cho_4_2014-09-13	Link
UA_Kie_Cho_1_2014-09-13	Link
UA_Kie_Cho_3_2014-09-13	Link
UA_Kie_Cho_1_2015-08-20	Link
UA_Kie_Cho_1_2015-06-15	Link
UA_Kie_Cho_4_2015-08-26	Link
UA_Kie_Cho_6_2015-08-26	Link
UA_Kie_Cho_3_2015-08-26	Link
UA_Kie_Cho_2_2015-08-26	Link
UA_Kie_Cho_5_2015-08-26	Link
UA_Kie_Cho_1_2015-08-26	Link
UA_Kie_Cho_1_2015-07-07	Link
UA_Kie_Cho_1_2016-09-04	Link
UA_Kie_Cho_1_2016-09-05	Link
UA_Kie_Cho_2_2016-09-04	Link
UA_Lvi_Dro_1_2014-08-24	Link
UA_Lvi_Dro_1_2015-09-18	Link
UA_Lvi_Dro_1_2016-09-12	Link
UA_Che_Kan_1_2016-07-08	Link
UA_Kha_Kha_1_2014-07-26	Link
UA_Kha_Kha_1_2014-09-14	Link
UA_Kha_Kha_1_2015-08-20	Link
UA_Kha_Kha_1_2016-08-18	Link
UA_Kie_Kyi_1_2014-08-09	Link
UA_Kie_Kyi_1_2014-09-08	Link
UA_Kie_Kyi_1_2014-10-11	Link
UA_Kie_Kyi_1_2015-08-10	Link
UA_Kie_Kyi_1_2016-09-04	Link
UA_Kie_Kyi_1_2016-10-03	Link
UA_Kie_Kyi_1_2016-08-06	Link
UA_Ode_Ode_1_2014-07-03	Link
UA_Ode_Ode_1_2014-07-22	Link
UA_Ode_Ode_1_2014-08-29	Link
UA_Ode_Ode_1_2014-10-10	Link
UA_Ode_Ode_1_2015-09-26	Link
UA_Ode_Ode_1_2015-06-30	Link
UA_Ode_Ode_1_2015-08-27	Link
UA_Ode_Ode_1_2015-07-26	Link
UA_Ode_Ode_1_2016-08-20	Link
UA_Ode_Ode_1_2016-09-15	Link
UA_Pol_Pyr_1_2014-08-20	Link
UA_Pol_Pyr_1_2015-08-26	Link
UA_Kie_Pri_1_2016-09-03	Link
UA_Che_Pyr_1_2016-08-23	Link
UA_Che_Uma_1_2014-10-01	Link
UA_Che_Uma_1_2015-09-26	Link
UA_Che_Uma_1_2016-09-17	Link
UA_Che_Uma_1_2016-09-11	Link
UA_Che_Var_1_2014-08-18	Link
UA_Che_Var_1_2015-08-25	Link
UA_Che_Var_1_2016-08-26	Link
RU_Cri_Yal_1_2014-06-20	Link
RU_Cri_Yal_1_2014-08-27	Link
RU_Cri_Yal_1_2015-06-24	Link
RU_Cri_Yal_1_2015-08-24	Link
RU_Cri_Yal_1_2016-08-20	Link
UA_Ode_Ode_1_2013-10-15	Link
UA_Ode_Ode_1_2013-05-16	Link
GB_Fif_Dai_1_2015-08-19	Link
GB_Fif_Dai_1_2016-08-06	Link
GB_Lei_Lut_1_2014-10-20	Link
GB_Lei_Mar_1_2014-10-20	Link
GB_Nor_Mar_1_2015-07-07	Link
GB_Nor_Mar_1_2016-10-23	Link
GB_She_She_1_2014-08-25	Link
GB_She_She_1_2015-10-04	Link
GB_Edi_Sou_1_2014-07-14	Link
US_Vir_Cha_1_2012-11-05	Link
US_Vir_Cha_1_2012-07-18	Link
US_Vir_Cha_1_2014-10-14	Link
US_Vir_Cha_1_2014-06-25	Link
US_Vir_Cha_1_2015-10-19	Link
US_Vir_Cha_1_2015-07-01	Link
US_Was_Tac_1_2014-07-15	Link
US_Wis_Cro_1_2012-09-11	Link
US_Wis_Cro_1_2012-10-20	Link
US_Wis_Cro_1_2012-06-10	Link
US_Wis_Cro_1_2013-09-22	Link
US_Wis_Cro_1_2013-07-02	Link
US_Wis_Cro_1_2014-09-18	Link
US_Wis_Cro_1_2014-06-25	Link